Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2bQ8BJF9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2bQ8BJF9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2bQ8BJF9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms