Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc40Q8BI79 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Gm10812-201ENSMUST00000099864 546 ntBASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc40Q8BI79 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Timm23-208ENSMUST00000226683 750 ntBASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc40Q8BI79 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.46■□□□□ 0.38
Ccdc40Q8BI79 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc40Q8BI79 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Gm38027-201ENSMUST00000192315 235 ntBASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc40Q8BI79 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms