Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trnp1Q80ZI1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trnp1Q80ZI1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Gm7063-201ENSMUST00000186840 981 ntBASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trnp1Q80ZI1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Gm13036-201ENSMUST00000117799 748 ntBASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Gm14822-201ENSMUST00000122247 291 ntBASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Gm27628-201ENSMUST00000184911 107 ntBASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trnp1Q80ZI1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trnp1Q80ZI1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.86■□□□□ 0.61
Trnp1Q80ZI1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms