Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Gm12933-201ENSMUST00000120203 872 ntBASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bQ80YF6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
Upk3bQ80YF6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bQ80YF6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bQ80YF6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bQ80YF6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gm13158-201ENSMUST00000122007 736 ntBASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gm27405-201ENSMUST00000184201 112 ntBASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gm18025-201ENSMUST00000221733 862 ntBASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Upk3bQ80YF6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Gm12896-201ENSMUST00000118430 226 ntBASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bQ80YF6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gm11249-201ENSMUST00000117071 859 ntBASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gm12382-201ENSMUST00000122005 922 ntBASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bQ80YF6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms