Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rps4l-201ENSMUST00000071745 943 ntBASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp6nlQ80XC3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Usp6nlQ80XC3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Gm5867-201ENSMUST00000063197 592 ntBASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp6nlQ80XC3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Usp6nlQ80XC3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp6nlQ80XC3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp6nlQ80XC3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Gm27525-201ENSMUST00000184465 107 ntBASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Gm6296-201ENSMUST00000222599 943 ntBASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp6nlQ80XC3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp6nlQ80XC3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms