Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Gm18958-201ENSMUST00000174258 762 ntBASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc116Q80X53 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ccdc116Q80X53 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ccdc116Q80X53 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Ccdc116Q80X53 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc116Q80X53 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc116Q80X53 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms