Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim36Q80WG7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim36Q80WG7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim36Q80WG7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim36Q80WG7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim36Q80WG7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim36Q80WG7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gm13401-201ENSMUST00000117074 291 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gm42545-201ENSMUST00000202755 922 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gm18025-201ENSMUST00000221733 862 ntBASIC16.2■□□□□ 0.18
Trim36Q80WG7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim36Q80WG7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Gm13836-201ENSMUST00000121159 501 ntBASIC16.19■□□□□ 0.18
Trim36Q80WG7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.19■□□□□ 0.18
Trim36Q80WG7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.19■□□□□ 0.18
Trim36Q80WG7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim36Q80WG7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trim36Q80WG7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim36Q80WG7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms