Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Haglr-201ENSMUST00000100000 2085 ntBASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38bQ80SY5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Gm4974-201ENSMUST00000209974 875 ntBASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38bQ80SY5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Gm7213-201ENSMUST00000215977 950 ntBASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38bQ80SY5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Gm10418-201ENSMUST00000100943 576 ntBASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Gm7791-201ENSMUST00000219066 539 ntBASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.46■□□□□ 0.39
Prpf38bQ80SY5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf38bQ80SY5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Gm43347-201ENSMUST00000200226 580 ntBASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf38bQ80SY5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf38bQ80SY5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms