Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.74■□□□□ 0.91
Ddx58Q6Q899 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx58Q6Q899 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx58Q6Q899 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.71■□□□□ 0.91
Ddx58Q6Q899 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx58Q6Q899 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ddx58Q6Q899 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ddx58Q6Q899 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Ddx58Q6Q899 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx58Q6Q899 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Gm7153-201ENSMUST00000117092 455 ntBASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Ddx58Q6Q899 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx58Q6Q899 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Ddx58Q6Q899 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms