Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgb4Q6P8W9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb4Q6P8W9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Gm17807-201ENSMUST00000186869 298 ntBASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
Hmgb4Q6P8W9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.52■□□□□ 0.4
Hmgb4Q6P8W9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb4Q6P8W9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb4Q6P8W9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hmgb4Q6P8W9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb4Q6P8W9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb4Q6P8W9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Gm6623-201ENSMUST00000173570 544 ntBASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb4Q6P8W9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms