Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abcf1Q6P542 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Gm10252-201ENSMUST00000209541 832 ntBASIC18.76■□□□□ 0.59
Abcf1Q6P542 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcf1Q6P542 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.75■□□□□ 0.59
Abcf1Q6P542 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcf1Q6P542 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Mir1199-201ENSMUST00000117015 119 ntBASIC18.74■□□□□ 0.59
Abcf1Q6P542 Gm12382-201ENSMUST00000122005 922 ntBASIC18.74■□□□□ 0.59
Abcf1Q6P542 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.74■□□□□ 0.59
Abcf1Q6P542 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcf1Q6P542 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abcf1Q6P542 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abcf1Q6P542 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms