Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Gm10355-201ENSMUST00000097146 517 ntBASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Fndc3c1Q6DFV6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Gm14822-201ENSMUST00000122247 291 ntBASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Auts2-212ENSMUST00000178555 309 ntBASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc3c1Q6DFV6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Gm15173-201ENSMUST00000122049 433 ntBASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.81■□□□□ 0.6
Fndc3c1Q6DFV6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Gm9727-201ENSMUST00000161387 555 ntBASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.8■□□□□ 0.6
Fndc3c1Q6DFV6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Gm10576-201ENSMUST00000191927 825 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 AV026068-213ENSMUST00000223675 1171 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Gm15590-201ENSMUST00000078419 552 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.79■□□□□ 0.6
Fndc3c1Q6DFV6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fndc3c1Q6DFV6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fndc3c1Q6DFV6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Fndc3c1Q6DFV6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms