Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.12■□□□□ 0.33
Cep290Q6A078 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Gm13616-201ENSMUST00000120600 222 ntBASIC17.12■□□□□ 0.33
Cep290Q6A078 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cep290Q6A078 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cep290Q6A078 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Gm5745-201ENSMUST00000183748 313 ntBASIC17.11■□□□□ 0.33
Cep290Q6A078 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cep290Q6A078 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cep290Q6A078 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.1■□□□□ 0.33
Cep290Q6A078 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.1■□□□□ 0.33
Cep290Q6A078 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.1■□□□□ 0.33
Cep290Q6A078 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cep290Q6A078 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cep290Q6A078 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cep290Q6A078 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cep290Q6A078 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Cep290Q6A078 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cep290Q6A078 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.09■□□□□ 0.33
Cep290Q6A078 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.09■□□□□ 0.33
Cep290Q6A078 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Gm11780-201ENSMUST00000136880 516 ntBASIC17.09■□□□□ 0.33
Cep290Q6A078 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.09■□□□□ 0.33
Cep290Q6A078 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.09■□□□□ 0.33
Cep290Q6A078 Mir6977-201ENSMUST00000184960 64 ntBASIC17.09■□□□□ 0.33
Cep290Q6A078 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cep290Q6A078 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.08■□□□□ 0.33
Cep290Q6A078 Gm7222-201ENSMUST00000117512 906 ntBASIC17.08■□□□□ 0.33
Cep290Q6A078 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cep290Q6A078 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.08■□□□□ 0.33
Cep290Q6A078 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.08■□□□□ 0.33
Cep290Q6A078 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cep290Q6A078 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.08■□□□□ 0.32
Cep290Q6A078 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.08■□□□□ 0.32
Cep290Q6A078 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cep290Q6A078 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cep290Q6A078 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.07■□□□□ 0.32
Cep290Q6A078 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cep290Q6A078 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.07■□□□□ 0.32
Cep290Q6A078 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms