Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.6■□□□□ 0.41
Scube3Q66PY1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.6■□□□□ 0.41
Scube3Q66PY1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scube3Q66PY1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.59■□□□□ 0.41
Scube3Q66PY1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.59■□□□□ 0.41
Scube3Q66PY1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scube3Q66PY1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.58■□□□□ 0.41
Scube3Q66PY1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scube3Q66PY1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scube3Q66PY1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scube3Q66PY1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scube3Q66PY1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.58■□□□□ 0.41
Scube3Q66PY1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scube3Q66PY1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Scube3Q66PY1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.58■□□□□ 0.4
Scube3Q66PY1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scube3Q66PY1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.57■□□□□ 0.4
Scube3Q66PY1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.57■□□□□ 0.4
Scube3Q66PY1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm11336-201ENSMUST00000118168 334 ntBASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scube3Q66PY1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Gm37722-201ENSMUST00000193757 208 ntBASIC17.56■□□□□ 0.4
Scube3Q66PY1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scube3Q66PY1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms