Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC21.16■□□□□ 0.98
Clcn1Q64347 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.16■□□□□ 0.98
Clcn1Q64347 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn1Q64347 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clcn1Q64347 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clcn1Q64347 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn1Q64347 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn1Q64347 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn1Q64347 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn1Q64347 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.14■□□□□ 0.97
Clcn1Q64347 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Clcn1Q64347 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Gm10052-201ENSMUST00000168019 960 ntBASIC21.14■□□□□ 0.97
Clcn1Q64347 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.14■□□□□ 0.97
Clcn1Q64347 Gm7729-201ENSMUST00000050143 801 ntBASIC21.14■□□□□ 0.97
Clcn1Q64347 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clcn1Q64347 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.14■□□□□ 0.97
Clcn1Q64347 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clcn1Q64347 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn1Q64347 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Clcn1Q64347 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.13■□□□□ 0.97
Clcn1Q64347 Gm18421-201ENSMUST00000204122 625 ntBASIC21.13■□□□□ 0.97
Clcn1Q64347 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC21.13■□□□□ 0.97
Clcn1Q64347 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.13■□□□□ 0.97
Clcn1Q64347 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn1Q64347 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.12■□□□□ 0.97
Clcn1Q64347 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.12■□□□□ 0.97
Clcn1Q64347 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.12■□□□□ 0.97
Clcn1Q64347 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn1Q64347 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clcn1Q64347 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Clcn1Q64347 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn1Q64347 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn1Q64347 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.11■□□□□ 0.97
Clcn1Q64347 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.11■□□□□ 0.97
Clcn1Q64347 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn1Q64347 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn1Q64347 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn1Q64347 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Clcn1Q64347 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.1■□□□□ 0.97
Clcn1Q64347 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.1■□□□□ 0.97
Clcn1Q64347 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.1■□□□□ 0.97
Clcn1Q64347 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.1■□□□□ 0.97
Clcn1Q64347 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn1Q64347 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms