Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Gm27646-201ENSMUST00000183989 110 ntBASIC13.89□□□□□ -0.19
Col7a1Q63870 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.89□□□□□ -0.19
Col7a1Q63870 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.89□□□□□ -0.19
Col7a1Q63870 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.89□□□□□ -0.19
Col7a1Q63870 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.89□□□□□ -0.19
Col7a1Q63870 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col7a1Q63870 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col7a1Q63870 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Col7a1Q63870 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col7a1Q63870 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Gm43433-201ENSMUST00000196573 481 ntBASIC13.88□□□□□ -0.19
Col7a1Q63870 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.88□□□□□ -0.19
Col7a1Q63870 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col7a1Q63870 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Col7a1Q63870 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col7a1Q63870 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col7a1Q63870 Gm13597-201ENSMUST00000121239 375 ntBASIC13.87□□□□□ -0.19
Col7a1Q63870 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.87□□□□□ -0.19
Col7a1Q63870 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.87□□□□□ -0.19
Col7a1Q63870 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col7a1Q63870 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Gm8825-201ENSMUST00000182565 998 ntBASIC13.87□□□□□ -0.19
Col7a1Q63870 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col7a1Q63870 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.87□□□□□ -0.19
Col7a1Q63870 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Col7a1Q63870 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Gm27300-201ENSMUST00000184085 97 ntBASIC13.86□□□□□ -0.19
Col7a1Q63870 Gm27335-201ENSMUST00000184758 97 ntBASIC13.86□□□□□ -0.19
Col7a1Q63870 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col7a1Q63870 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.85□□□□□ -0.19
Col7a1Q63870 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.85□□□□□ -0.19
Col7a1Q63870 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col7a1Q63870 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col7a1Q63870 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.84□□□□□ -0.19
Col7a1Q63870 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms