Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vamp1Q62442 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vamp1Q62442 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.41□□□□□ -0.1
Vamp1Q62442 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Vamp1Q62442 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp1Q62442 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Vamp1Q62442 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vamp1Q62442 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.4□□□□□ -0.1
Vamp1Q62442 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.4□□□□□ -0.1
Vamp1Q62442 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vamp1Q62442 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vamp1Q62442 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vamp1Q62442 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vamp1Q62442 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp1Q62442 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.4□□□□□ -0.11
Vamp1Q62442 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Vamp1Q62442 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vamp1Q62442 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Vamp1Q62442 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Vamp1Q62442 Gm13234-201ENSMUST00000120010 747 ntBASIC14.39□□□□□ -0.11
Vamp1Q62442 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.39□□□□□ -0.11
Vamp1Q62442 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vamp1Q62442 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp1Q62442 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vamp1Q62442 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.38□□□□□ -0.11
Vamp1Q62442 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Nespas-201ENSMUST00000143738 1083 ntBASIC14.38□□□□□ -0.11
Vamp1Q62442 Gm27454-201ENSMUST00000185090 204 ntBASIC14.38□□□□□ -0.11
Vamp1Q62442 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vamp1Q62442 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp1Q62442 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Vamp1Q62442 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.38□□□□□ -0.11
Vamp1Q62442 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vamp1Q62442 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp1Q62442 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp1Q62442 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp1Q62442 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Vamp1Q62442 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms