Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.19■□□□□ 0.34
Six1Q62231 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Gm18958-201ENSMUST00000174258 762 ntBASIC17.19■□□□□ 0.34
Six1Q62231 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.19■□□□□ 0.34
Six1Q62231 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.19■□□□□ 0.34
Six1Q62231 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six1Q62231 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six1Q62231 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Six1Q62231 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six1Q62231 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.19■□□□□ 0.34
Six1Q62231 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six1Q62231 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Six1Q62231 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.18■□□□□ 0.34
Six1Q62231 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.18■□□□□ 0.34
Six1Q62231 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six1Q62231 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Six1Q62231 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.17■□□□□ 0.34
Six1Q62231 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.17■□□□□ 0.34
Six1Q62231 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Six1Q62231 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.17■□□□□ 0.34
Six1Q62231 Timm23-208ENSMUST00000226683 750 ntBASIC17.17■□□□□ 0.34
Six1Q62231 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Six1Q62231 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six1Q62231 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.16■□□□□ 0.34
Six1Q62231 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.16■□□□□ 0.34
Six1Q62231 Gm3375-201ENSMUST00000203929 796 ntBASIC17.16■□□□□ 0.34
Six1Q62231 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six1Q62231 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.16■□□□□ 0.34
Six1Q62231 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.16■□□□□ 0.34
Six1Q62231 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six1Q62231 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Six1Q62231 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Six1Q62231 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.15■□□□□ 0.34
Six1Q62231 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.15■□□□□ 0.34
Six1Q62231 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.15■□□□□ 0.34
Six1Q62231 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Six1Q62231 Gm20760-201ENSMUST00000179197 648 ntBASIC17.15■□□□□ 0.34
Six1Q62231 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Six1Q62231 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.15■□□□□ 0.34
Six1Q62231 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six1Q62231 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms