Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Gm11336-201ENSMUST00000118168 334 ntBASIC19.78■□□□□ 0.76
Ctr9Q62018 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ctr9Q62018 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ctr9Q62018 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ctr9Q62018 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ctr9Q62018 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctr9Q62018 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.77■□□□□ 0.76
Ctr9Q62018 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctr9Q62018 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ctr9Q62018 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.77■□□□□ 0.76
Ctr9Q62018 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctr9Q62018 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ctr9Q62018 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctr9Q62018 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ctr9Q62018 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ctr9Q62018 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ctr9Q62018 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.76■□□□□ 0.75
Ctr9Q62018 Gm7284-201ENSMUST00000131667 944 ntBASIC19.76■□□□□ 0.75
Ctr9Q62018 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.76■□□□□ 0.75
Ctr9Q62018 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctr9Q62018 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.75■□□□□ 0.75
Ctr9Q62018 Gm11950-201ENSMUST00000121615 838 ntBASIC19.75■□□□□ 0.75
Ctr9Q62018 Gm6623-201ENSMUST00000173570 544 ntBASIC19.75■□□□□ 0.75
Ctr9Q62018 Gm27704-201ENSMUST00000185094 107 ntBASIC19.75■□□□□ 0.75
Ctr9Q62018 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.75■□□□□ 0.75
Ctr9Q62018 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.75■□□□□ 0.75
Ctr9Q62018 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.75■□□□□ 0.75
Ctr9Q62018 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.75■□□□□ 0.75
Ctr9Q62018 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctr9Q62018 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.74■□□□□ 0.75
Ctr9Q62018 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Ctr9Q62018 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Gm18115-201ENSMUST00000221209 621 ntBASIC19.74■□□□□ 0.75
Ctr9Q62018 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctr9Q62018 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Gm44450-201ENSMUST00000199528 114 ntBASIC19.73■□□□□ 0.75
Ctr9Q62018 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.73■□□□□ 0.75
Ctr9Q62018 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ctr9Q62018 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ctr9Q62018 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ctr9Q62018 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ctr9Q62018 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.72■□□□□ 0.75
Ctr9Q62018 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.72■□□□□ 0.75
Ctr9Q62018 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctr9Q62018 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms