Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.12■□□□□ 0.17
Rai1Q61818 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.12■□□□□ 0.17
Rai1Q61818 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.12■□□□□ 0.17
Rai1Q61818 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rai1Q61818 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rai1Q61818 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Gm8969-201ENSMUST00000199694 526 ntBASIC16.12■□□□□ 0.17
Rai1Q61818 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Rai1Q61818 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rai1Q61818 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rai1Q61818 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.11■□□□□ 0.17
Rai1Q61818 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rai1Q61818 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.11■□□□□ 0.17
Rai1Q61818 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.11■□□□□ 0.17
Rai1Q61818 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.11■□□□□ 0.17
Rai1Q61818 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Gm5364-201ENSMUST00000216789 889 ntBASIC16.11■□□□□ 0.17
Rai1Q61818 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rai1Q61818 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.11■□□□□ 0.17
Rai1Q61818 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rai1Q61818 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rai1Q61818 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rai1Q61818 Gm4995-201ENSMUST00000117247 432 ntBASIC16.1■□□□□ 0.17
Rai1Q61818 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.1■□□□□ 0.17
Rai1Q61818 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Rai1Q61818 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.1■□□□□ 0.17
Rai1Q61818 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.1■□□□□ 0.17
Rai1Q61818 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rai1Q61818 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.1■□□□□ 0.17
Rai1Q61818 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rai1Q61818 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.1■□□□□ 0.17
Rai1Q61818 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
Rai1Q61818 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Rai1Q61818 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rai1Q61818 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.1■□□□□ 0.17
Rai1Q61818 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rai1Q61818 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rai1Q61818 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Gm11594-201ENSMUST00000122313 162 ntBASIC16.09■□□□□ 0.17
Rai1Q61818 Gm12497-201ENSMUST00000138778 237 ntBASIC16.09■□□□□ 0.17
Rai1Q61818 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.09■□□□□ 0.17
Rai1Q61818 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.09■□□□□ 0.17
Rai1Q61818 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rai1Q61818 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.09■□□□□ 0.17
Rai1Q61818 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rai1Q61818 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.08■□□□□ 0.17
Rai1Q61818 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.17
Rai1Q61818 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Gm4535-201ENSMUST00000182274 558 ntBASIC16.08■□□□□ 0.17
Rai1Q61818 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.08■□□□□ 0.17
Rai1Q61818 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rai1Q61818 Gm10355-201ENSMUST00000097146 517 ntBASIC16.08■□□□□ 0.17
Rai1Q61818 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rai1Q61818 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms