Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.28■□□□□ 0.04
Cd47Q61735 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Cd47Q61735 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cd47Q61735 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cd47Q61735 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cd47Q61735 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.28■□□□□ 0.04
Cd47Q61735 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cd47Q61735 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cd47Q61735 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cd47Q61735 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cd47Q61735 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cd47Q61735 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.26■□□□□ 0.03
Cd47Q61735 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Cd47Q61735 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cd47Q61735 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Cd47Q61735 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cd47Q61735 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd47Q61735 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd47Q61735 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd47Q61735 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.25■□□□□ 0.03
Cd47Q61735 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.25■□□□□ 0.03
Cd47Q61735 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cd47Q61735 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cd47Q61735 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cd47Q61735 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd47Q61735 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.24■□□□□ 0.03
Cd47Q61735 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cd47Q61735 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Gm20760-201ENSMUST00000179197 648 ntBASIC15.24■□□□□ 0.03
Cd47Q61735 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd47Q61735 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms