Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ift88Q61371 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ift88Q61371 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ift88Q61371 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ift88Q61371 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ift88Q61371 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ift88Q61371 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ift88Q61371 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.58■□□□□ 0.57
Ift88Q61371 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.58■□□□□ 0.56
Ift88Q61371 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.58■□□□□ 0.56
Ift88Q61371 Trmt13-210ENSMUST00000198454 880 ntBASIC18.58■□□□□ 0.56
Ift88Q61371 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ift88Q61371 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.58■□□□□ 0.56
Ift88Q61371 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ift88Q61371 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ift88Q61371 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ift88Q61371 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ift88Q61371 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ift88Q61371 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.56■□□□□ 0.56
Ift88Q61371 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ift88Q61371 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ift88Q61371 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.55■□□□□ 0.56
Ift88Q61371 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ift88Q61371 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ift88Q61371 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Ift88Q61371 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ift88Q61371 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Gm27000-201ENSMUST00000182943 842 ntBASIC18.54■□□□□ 0.56
Ift88Q61371 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.54■□□□□ 0.56
Ift88Q61371 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.54■□□□□ 0.56
Ift88Q61371 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ift88Q61371 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ift88Q61371 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms