Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Sdf4Q61112 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sdf4Q61112 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.01■□□□□ 0.31
Sdf4Q61112 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sdf4Q61112 Gm7889-201ENSMUST00000185591 958 ntBASIC17.01■□□□□ 0.31
Sdf4Q61112 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Sdf4Q61112 Gm7370-201ENSMUST00000219471 767 ntBASIC17.01■□□□□ 0.31
Sdf4Q61112 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdf4Q61112 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17■□□□□ 0.31
Sdf4Q61112 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17■□□□□ 0.31
Sdf4Q61112 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17■□□□□ 0.31
Sdf4Q61112 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17■□□□□ 0.31
Sdf4Q61112 Gm18959-201ENSMUST00000208954 655 ntBASIC17■□□□□ 0.31
Sdf4Q61112 AC153881.2-201ENSMUST00000214877 204 ntBASIC17■□□□□ 0.31
Sdf4Q61112 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sdf4Q61112 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sdf4Q61112 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.99■□□□□ 0.31
Sdf4Q61112 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdf4Q61112 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.98■□□□□ 0.31
Sdf4Q61112 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Mir5130-201ENSMUST00000175160 84 ntBASIC16.98■□□□□ 0.31
Sdf4Q61112 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Gm45058-201ENSMUST00000205810 766 ntBASIC16.98■□□□□ 0.31
Sdf4Q61112 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sdf4Q61112 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sdf4Q61112 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.97■□□□□ 0.31
Sdf4Q61112 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.97■□□□□ 0.31
Sdf4Q61112 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Gm6433-201ENSMUST00000118634 875 ntBASIC16.97■□□□□ 0.31
Sdf4Q61112 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sdf4Q61112 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdf4Q61112 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms