Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.56■□□□□ 0.24
Col12a1Q60847 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.56■□□□□ 0.24
Col12a1Q60847 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col12a1Q60847 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col12a1Q60847 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Col12a1Q60847 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.55■□□□□ 0.24
Col12a1Q60847 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.55■□□□□ 0.24
Col12a1Q60847 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col12a1Q60847 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
Col12a1Q60847 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col12a1Q60847 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Col12a1Q60847 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col12a1Q60847 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col12a1Q60847 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col12a1Q60847 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col12a1Q60847 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.54■□□□□ 0.24
Col12a1Q60847 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col12a1Q60847 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.54■□□□□ 0.24
Col12a1Q60847 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col12a1Q60847 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.53■□□□□ 0.24
Col12a1Q60847 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col12a1Q60847 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col12a1Q60847 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.52■□□□□ 0.24
Col12a1Q60847 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.52■□□□□ 0.24
Col12a1Q60847 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Mir8112-201ENSMUST00000184382 131 ntBASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.52■□□□□ 0.24
Col12a1Q60847 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.52■□□□□ 0.24
Col12a1Q60847 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.52■□□□□ 0.24
Col12a1Q60847 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm25745-201ENSMUST00000174945 133 ntBASIC16.52■□□□□ 0.24
Col12a1Q60847 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col12a1Q60847 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col12a1Q60847 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.52■□□□□ 0.23
Col12a1Q60847 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col12a1Q60847 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col12a1Q60847 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col12a1Q60847 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Col12a1Q60847 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.51■□□□□ 0.23
Col12a1Q60847 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.51■□□□□ 0.23
Col12a1Q60847 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col12a1Q60847 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.5■□□□□ 0.23
Col12a1Q60847 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col12a1Q60847 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col12a1Q60847 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms