Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.15■□□□□ 0.82
NfkbibQ60778 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
NfkbibQ60778 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.15■□□□□ 0.82
NfkbibQ60778 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NfkbibQ60778 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NfkbibQ60778 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NfkbibQ60778 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NfkbibQ60778 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.13■□□□□ 0.81
NfkbibQ60778 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NfkbibQ60778 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.13■□□□□ 0.81
NfkbibQ60778 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NfkbibQ60778 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NfkbibQ60778 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NfkbibQ60778 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NfkbibQ60778 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.12■□□□□ 0.81
NfkbibQ60778 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NfkbibQ60778 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NfkbibQ60778 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NfkbibQ60778 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.12■□□□□ 0.81
NfkbibQ60778 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.12■□□□□ 0.81
NfkbibQ60778 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NfkbibQ60778 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NfkbibQ60778 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.11■□□□□ 0.81
NfkbibQ60778 Gm27357-201ENSMUST00000183754 135 ntBASIC20.11■□□□□ 0.81
NfkbibQ60778 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.11■□□□□ 0.81
NfkbibQ60778 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NfkbibQ60778 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NfkbibQ60778 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NfkbibQ60778 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NfkbibQ60778 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.1■□□□□ 0.81
NfkbibQ60778 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NfkbibQ60778 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.1■□□□□ 0.81
NfkbibQ60778 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NfkbibQ60778 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NfkbibQ60778 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NfkbibQ60778 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NfkbibQ60778 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NfkbibQ60778 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NfkbibQ60778 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NfkbibQ60778 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NfkbibQ60778 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NfkbibQ60778 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms