Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Gm27867-201ENSMUST00000184778 125 ntBASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.84■■□□□ 1.09
Scaf1Q5U4C3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Scaf1Q5U4C3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scaf1Q5U4C3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Gm11452-201ENSMUST00000122376 690 ntBASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scaf1Q5U4C3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scaf1Q5U4C3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44357-201ENSMUST00000195897 142 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm19658-201ENSMUST00000196231 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44367-201ENSMUST00000196836 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44350-201ENSMUST00000197197 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44390-201ENSMUST00000197533 144 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44313-201ENSMUST00000198018 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44486-201ENSMUST00000198508 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44314-201ENSMUST00000199263 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44394-201ENSMUST00000199558 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44484-201ENSMUST00000199873 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44466-201ENSMUST00000200264 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Gm44359-201ENSMUST00000200671 138 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 AW822252-206ENSMUST00000208904 237 ntBASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scaf1Q5U4C3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Gm2651-201ENSMUST00000203560 838 ntBASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.79■■□□□ 1.08
Scaf1Q5U4C3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms