Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gm7638-201ENSMUST00000121348 967 ntBASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-3Q5R1E6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Gm38027-201ENSMUST00000192315 235 ntBASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-3Q5R1E6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-3Q5R1E6 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.46□□□□□ -0.26
Trav6-3Q5R1E6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav6-3Q5R1E6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav6-3Q5R1E6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-3Q5R1E6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Gm12085-201ENSMUST00000119263 940 ntBASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-3Q5R1E6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Gm15039-201ENSMUST00000118914 875 ntBASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Gm18958-201ENSMUST00000174258 762 ntBASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6-3Q5R1E6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms