Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm11927-201ENSMUST00000118472 759 ntBASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm6576-201ENSMUST00000169678 883 ntBASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms