Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm7729-201ENSMUST00000050143 801 ntBASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf43Q5NCP0 Phf7-203ENSMUST00000226565 1971 ntBASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf43Q5NCP0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf43Q5NCP0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Gm44450-201ENSMUST00000199528 114 ntBASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf43Q5NCP0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf43Q5NCP0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf43Q5NCP0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf43Q5NCP0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf43Q5NCP0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf43Q5NCP0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Gm13312-201ENSMUST00000119631 718 ntBASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Gm29707-201ENSMUST00000196325 491 ntBASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Rps4l-201ENSMUST00000071745 943 ntBASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf43Q5NCP0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms