Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne3Q4FZC9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne3Q4FZC9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syne3Q4FZC9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Syne3Q4FZC9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syne3Q4FZC9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Syne3Q4FZC9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.77■□□□□ 0.44
Syne3Q4FZC9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Syne3Q4FZC9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Syne3Q4FZC9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.77■□□□□ 0.43
Syne3Q4FZC9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne3Q4FZC9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms