Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm10566-201ENSMUST00000086739 996 ntBASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tmem40Q4FJU9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tmem40Q4FJU9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tmem40Q4FJU9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Gm27742-201ENSMUST00000184667 60 ntBASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tmem40Q4FJU9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Mir770-201ENSMUST00000103252 94 ntBASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tmem40Q4FJU9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms