Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ckap2Q3V1H1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Gm11336-201ENSMUST00000118168 334 ntBASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ckap2Q3V1H1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ckap2Q3V1H1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Gm29707-201ENSMUST00000196325 491 ntBASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Gm18421-201ENSMUST00000204122 625 ntBASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
Ckap2Q3V1H1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ckap2Q3V1H1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Gm13836-201ENSMUST00000121159 501 ntBASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Gm37722-201ENSMUST00000193757 208 ntBASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ckap2Q3V1H1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ckap2Q3V1H1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms