Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Gm12895-201ENSMUST00000122214 226 ntBASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp48Q3V0C5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Usp48Q3V0C5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp48Q3V0C5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Gm18195-201ENSMUST00000207604 706 ntBASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp48Q3V0C5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Gm8969-201ENSMUST00000199694 526 ntBASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp48Q3V0C5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp48Q3V0C5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms