Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.27■□□□□ 0.19
Rnf223Q3UV31 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf223Q3UV31 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf223Q3UV31 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.27■□□□□ 0.19
Rnf223Q3UV31 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf223Q3UV31 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf223Q3UV31 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf223Q3UV31 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Mir3081-201ENSMUST00000175305 84 ntBASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Gm28033-201ENSMUST00000184224 96 ntBASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Rnf223Q3UV31 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf223Q3UV31 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Gm27357-201ENSMUST00000183754 135 ntBASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Gm18669-201ENSMUST00000216049 778 ntBASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf223Q3UV31 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms