Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Gm37722-201ENSMUST00000193757 208 ntBASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nlrc4Q3UP24 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm11355-201ENSMUST00000121120 306 ntBASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm44450-201ENSMUST00000199528 114 ntBASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Gm18115-201ENSMUST00000221209 621 ntBASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nlrc4Q3UP24 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gm11336-201ENSMUST00000118168 334 ntBASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nlrc4Q3UP24 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nlrc4Q3UP24 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms