Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Naf1Q3UMQ8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Naf1Q3UMQ8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Naf1Q3UMQ8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Naf1Q3UMQ8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gm28033-201ENSMUST00000184224 96 ntBASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gm17807-201ENSMUST00000186869 298 ntBASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.01■□□□□ 0.31
Naf1Q3UMQ8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Gm27742-201ENSMUST00000184667 60 ntBASIC17■□□□□ 0.31
Naf1Q3UMQ8 Otx2os1-206ENSMUST00000228153 787 ntBASIC17■□□□□ 0.31
Naf1Q3UMQ8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Naf1Q3UMQ8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms