Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Spg11Q3UHA3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.42■□□□□ 0.06
Spg11Q3UHA3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm22175-201ENSMUST00000175007 78 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Gm44492-201ENSMUST00000197012 141 ntBASIC15.41■□□□□ 0.06
Spg11Q3UHA3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Spg11Q3UHA3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Gm27622-201ENSMUST00000183779 60 ntBASIC15.4■□□□□ 0.06
Spg11Q3UHA3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.4■□□□□ 0.06
Spg11Q3UHA3 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Spg11Q3UHA3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Spg11Q3UHA3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Spg11Q3UHA3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Gm29707-201ENSMUST00000196325 491 ntBASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Spg11Q3UHA3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Gm18187-201ENSMUST00000196476 984 ntBASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Spg11Q3UHA3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms