Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Gm11452-201ENSMUST00000122376 690 ntBASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Carmil3Q3UFQ8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Gm18733-201ENSMUST00000173950 856 ntBASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Carmil3Q3UFQ8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Gm18195-201ENSMUST00000207604 706 ntBASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Carmil3Q3UFQ8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Rps4l-201ENSMUST00000071745 943 ntBASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Carmil3Q3UFQ8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Carmil3Q3UFQ8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Carmil3Q3UFQ8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Carmil3Q3UFQ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Carmil3Q3UFQ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Carmil3Q3UFQ8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Carmil3Q3UFQ8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms