Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.71■□□□□ 0.75
Rnf180Q3U827 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf180Q3U827 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Rnf180Q3U827 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Gm43433-201ENSMUST00000196573 481 ntBASIC19.7■□□□□ 0.74
Rnf180Q3U827 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf180Q3U827 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Gm5682-201ENSMUST00000173402 505 ntBASIC19.69■□□□□ 0.74
Rnf180Q3U827 Gm27430-201ENSMUST00000184585 107 ntBASIC19.69■□□□□ 0.74
Rnf180Q3U827 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Gm44333-201ENSMUST00000197168 107 ntBASIC19.69■□□□□ 0.74
Rnf180Q3U827 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf180Q3U827 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.69■□□□□ 0.74
Rnf180Q3U827 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf180Q3U827 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf180Q3U827 Mir6990-201ENSMUST00000183724 91 ntBASIC19.68■□□□□ 0.74
Rnf180Q3U827 Gm43474-201ENSMUST00000196415 774 ntBASIC19.68■□□□□ 0.74
Rnf180Q3U827 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Idnk-204ENSMUST00000226010 1898 ntBASIC19.67■□□□□ 0.74
Rnf180Q3U827 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf180Q3U827 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.66■□□□□ 0.74
Rnf180Q3U827 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.66■□□□□ 0.74
Rnf180Q3U827 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf180Q3U827 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 Mir449b-201ENSMUST00000104833 80 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Gm17968-201ENSMUST00000194902 784 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 Gm45167-201ENSMUST00000208007 322 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.65■□□□□ 0.74
Rnf180Q3U827 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf180Q3U827 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf180Q3U827 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf180Q3U827 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf180Q3U827 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms