Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Gm11336-201ENSMUST00000118168 334 ntBASIC15.78■□□□□ 0.12
Mmp25Q3U435 AA414768-201ENSMUST00000121924 1257 ntBASIC15.78■□□□□ 0.12
Mmp25Q3U435 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Gm25016-201ENSMUST00000158399 131 ntBASIC15.78■□□□□ 0.12
Mmp25Q3U435 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.78■□□□□ 0.12
Mmp25Q3U435 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.78■□□□□ 0.12
Mmp25Q3U435 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp25Q3U435 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.77■□□□□ 0.12
Mmp25Q3U435 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Gm37722-201ENSMUST00000193757 208 ntBASIC15.77■□□□□ 0.12
Mmp25Q3U435 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.77■□□□□ 0.12
Mmp25Q3U435 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp25Q3U435 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Mmp25Q3U435 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Mmp25Q3U435 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Mmp25Q3U435 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.76■□□□□ 0.11
Mmp25Q3U435 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Gm5587-201ENSMUST00000206270 674 ntBASIC15.76■□□□□ 0.11
Mmp25Q3U435 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Mmp25Q3U435 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.75■□□□□ 0.11
Mmp25Q3U435 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Mmp25Q3U435 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.74■□□□□ 0.11
Mmp25Q3U435 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms