Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Xrra1Q3U3V8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Xrra1Q3U3V8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Gm43799-201ENSMUST00000201845 579 ntBASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Xrra1Q3U3V8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Gm13559-201ENSMUST00000120476 863 ntBASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrra1Q3U3V8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Gm6433-201ENSMUST00000118634 875 ntBASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrra1Q3U3V8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Xrra1Q3U3V8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Gm2274-201ENSMUST00000184539 609 ntBASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Mir7071-201ENSMUST00000184847 69 ntBASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrra1Q3U3V8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16■□□□□ 0.15
Xrra1Q3U3V8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Xrra1Q3U3V8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms