Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.92□□□□□ -0.18
Trim63Q38HM4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.92□□□□□ -0.18
Trim63Q38HM4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim63Q38HM4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.91□□□□□ -0.18
Trim63Q38HM4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim63Q38HM4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim63Q38HM4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.9□□□□□ -0.18
Trim63Q38HM4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim63Q38HM4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.9□□□□□ -0.18
Trim63Q38HM4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.9□□□□□ -0.18
Trim63Q38HM4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim63Q38HM4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim63Q38HM4 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.9□□□□□ -0.18
Trim63Q38HM4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim63Q38HM4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.89□□□□□ -0.19
Trim63Q38HM4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim63Q38HM4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms