Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Gm29707-201ENSMUST00000196325 491 ntBASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Gm12138-201ENSMUST00000122180 951 ntBASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Ush2AQ2QI47 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 AC121961.1-201ENSMUST00000218594 1779 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm27301-201ENSMUST00000184012 127 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 AC132265.1-201ENSMUST00000219233 1665 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm12497-201ENSMUST00000138778 237 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Gm7619-201ENSMUST00000210649 1282 ntBASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Ush2AQ2QI47 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 AC093926.2-201ENSMUST00000214468 1228 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm18688-201ENSMUST00000204695 1859 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm6226-201ENSMUST00000117765 1146 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm10253-201ENSMUST00000194270 940 ntBASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Ush2AQ2QI47 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Thap2-203ENSMUST00000218989 527 ntBASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Gm5357-201ENSMUST00000212720 1924 ntBASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Gm15487-201ENSMUST00000122373 465 ntBASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms