Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.97□□□□□ -0.17
Tff1Q08423 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tff1Q08423 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.97□□□□□ -0.17
Tff1Q08423 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Tff1Q08423 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Tff1Q08423 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.97□□□□□ -0.17
Tff1Q08423 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Tff1Q08423 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.96□□□□□ -0.17
Tff1Q08423 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.96□□□□□ -0.17
Tff1Q08423 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tff1Q08423 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tff1Q08423 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tff1Q08423 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tff1Q08423 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Tff1Q08423 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tff1Q08423 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tff1Q08423 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.96□□□□□ -0.18
Tff1Q08423 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Tff1Q08423 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.95□□□□□ -0.18
Tff1Q08423 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tff1Q08423 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Tff1Q08423 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Mir6349-201ENSMUST00000184059 97 ntBASIC13.95□□□□□ -0.18
Tff1Q08423 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Tff1Q08423 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.95□□□□□ -0.18
Tff1Q08423 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tff1Q08423 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.94□□□□□ -0.18
Tff1Q08423 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tff1Q08423 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.94□□□□□ -0.18
Tff1Q08423 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Gm43799-201ENSMUST00000201845 579 ntBASIC13.94□□□□□ -0.18
Tff1Q08423 Gm42545-201ENSMUST00000202755 922 ntBASIC13.94□□□□□ -0.18
Tff1Q08423 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.94□□□□□ -0.18
Tff1Q08423 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.94□□□□□ -0.18
Tff1Q08423 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Tff1Q08423 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Gm5417-201ENSMUST00000079706 384 ntBASIC13.94□□□□□ -0.18
Tff1Q08423 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tff1Q08423 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms