Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IhhP97812 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.38■□□□□ 0.37
IhhP97812 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.38■□□□□ 0.37
IhhP97812 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.38■□□□□ 0.37
IhhP97812 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.38■□□□□ 0.37
IhhP97812 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IhhP97812 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.38■□□□□ 0.37
IhhP97812 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IhhP97812 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.37■□□□□ 0.37
IhhP97812 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
IhhP97812 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IhhP97812 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.36■□□□□ 0.37
IhhP97812 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.36■□□□□ 0.37
IhhP97812 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.36■□□□□ 0.37
IhhP97812 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IhhP97812 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Gm27742-201ENSMUST00000184667 60 ntBASIC17.36■□□□□ 0.37
IhhP97812 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.36■□□□□ 0.37
IhhP97812 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IhhP97812 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.35■□□□□ 0.37
IhhP97812 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.35■□□□□ 0.37
IhhP97812 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.35■□□□□ 0.37
IhhP97812 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IhhP97812 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IhhP97812 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Gm45328-201ENSMUST00000210942 917 ntBASIC17.34■□□□□ 0.37
IhhP97812 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.34■□□□□ 0.37
IhhP97812 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IhhP97812 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IhhP97812 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IhhP97812 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IhhP97812 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.33■□□□□ 0.37
IhhP97812 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.33■□□□□ 0.37
IhhP97812 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
IhhP97812 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.33■□□□□ 0.36
IhhP97812 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
IhhP97812 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
IhhP97812 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
IhhP97812 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
IhhP97812 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IhhP97812 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.32■□□□□ 0.36
IhhP97812 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms