Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx3-2P97503 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx3-2P97503 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nkx3-2P97503 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx3-2P97503 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx3-2P97503 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx3-2P97503 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Gm11355-201ENSMUST00000121120 306 ntBASIC15.83■□□□□ 0.12
Nkx3-2P97503 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.83■□□□□ 0.12
Nkx3-2P97503 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Actl10-202ENSMUST00000226583 1501 ntBASIC15.83■□□□□ 0.12
Nkx3-2P97503 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nkx3-2P97503 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.82■□□□□ 0.12
Nkx3-2P97503 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.82■□□□□ 0.12
Nkx3-2P97503 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx3-2P97503 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Gm26039-201ENSMUST00000158152 144 ntBASIC15.81■□□□□ 0.12
Nkx3-2P97503 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Gm7367-201ENSMUST00000057611 492 ntBASIC15.81■□□□□ 0.12
Nkx3-2P97503 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Nkx3-2P97503 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.8■□□□□ 0.12
Nkx3-2P97503 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx3-2P97503 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms