Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm44346-201ENSMUST00000198851 141 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.48□□□□□ -0.57
PrkdcP97313 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.48□□□□□ -0.57
PrkdcP97313 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PrkdcP97313 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
PrkdcP97313 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.47□□□□□ -0.57
PrkdcP97313 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.47□□□□□ -0.57
PrkdcP97313 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.47□□□□□ -0.57
PrkdcP97313 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.47□□□□□ -0.57
PrkdcP97313 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.47□□□□□ -0.57
PrkdcP97313 Mir8112-201ENSMUST00000184382 131 ntBASIC11.47□□□□□ -0.57
PrkdcP97313 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.47□□□□□ -0.57
PrkdcP97313 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PrkdcP97313 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.47□□□□□ -0.57
PrkdcP97313 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkdcP97313 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PrkdcP97313 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
PrkdcP97313 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PrkdcP97313 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkdcP97313 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PrkdcP97313 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkdcP97313 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkdcP97313 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.46□□□□□ -0.57
PrkdcP97313 Gm13597-201ENSMUST00000121239 375 ntBASIC11.46□□□□□ -0.57
PrkdcP97313 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.46□□□□□ -0.57
PrkdcP97313 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.46□□□□□ -0.57
PrkdcP97313 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PrkdcP97313 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
PrkdcP97313 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.46□□□□□ -0.58
PrkdcP97313 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
PrkdcP97313 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PrkdcP97313 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PrkdcP97313 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gm17968-201ENSMUST00000194902 784 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gm27300-201ENSMUST00000184085 97 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Gm27335-201ENSMUST00000184758 97 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.45□□□□□ -0.58
PrkdcP97313 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PrkdcP97313 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Gm5866-201ENSMUST00000177881 973 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Gm4899-201ENSMUST00000178708 719 ntBASIC11.45□□□□□ -0.58
PrkdcP97313 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PrkdcP97313 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
PrkdcP97313 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PrkdcP97313 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms