Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim43cP86449 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim43cP86449 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.23■□□□□ 0.51
Trim43cP86449 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim43cP86449 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim43cP86449 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
Trim43cP86449 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim43cP86449 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim43cP86449 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim43cP86449 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim43cP86449 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.22■□□□□ 0.51
Trim43cP86449 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm18959-201ENSMUST00000208954 655 ntBASIC18.22■□□□□ 0.51
Trim43cP86449 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim43cP86449 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.22■□□□□ 0.51
Trim43cP86449 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim43cP86449 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim43cP86449 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim43cP86449 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim43cP86449 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim43cP86449 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim43cP86449 Gm18032-201ENSMUST00000222541 538 ntBASIC18.21■□□□□ 0.51
Trim43cP86449 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Gm9987-201ENSMUST00000069768 567 ntBASIC18.21■□□□□ 0.51
Trim43cP86449 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim43cP86449 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim43cP86449 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim43cP86449 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim43cP86449 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.2■□□□□ 0.5
Trim43cP86449 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim43cP86449 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.2■□□□□ 0.5
Trim43cP86449 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim43cP86449 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim43cP86449 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim43cP86449 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim43cP86449 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim43cP86449 Gm10231-201ENSMUST00000181584 441 ntBASIC18.19■□□□□ 0.5
Trim43cP86449 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Gm10175-202ENSMUST00000208752 441 ntBASIC18.19■□□□□ 0.5
Trim43cP86449 Gm18115-201ENSMUST00000221209 621 ntBASIC18.19■□□□□ 0.5
Trim43cP86449 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim43cP86449 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms