Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm37292-201ENSMUST00000192062 758 ntBASIC17.24■□□□□ 0.35
Trim43bP86448 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Gm42545-201ENSMUST00000202755 922 ntBASIC17.24■□□□□ 0.35
Trim43bP86448 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim43bP86448 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim43bP86448 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim43bP86448 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim43bP86448 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.24■□□□□ 0.35
Trim43bP86448 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim43bP86448 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim43bP86448 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trim43bP86448 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43bP86448 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim43bP86448 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim43bP86448 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim43bP86448 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim43bP86448 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim43bP86448 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43bP86448 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim43bP86448 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Mir5122-201ENSMUST00000175004 89 ntBASIC17.22■□□□□ 0.35
Trim43bP86448 Gm37055-201ENSMUST00000191866 133 ntBASIC17.22■□□□□ 0.35
Trim43bP86448 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.22■□□□□ 0.35
Trim43bP86448 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim43bP86448 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43bP86448 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim43bP86448 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim43bP86448 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim43bP86448 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Gm13401-201ENSMUST00000117074 291 ntBASIC17.21■□□□□ 0.35
Trim43bP86448 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim43bP86448 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Odf3b-204ENSMUST00000227834 930 ntBASIC17.21■□□□□ 0.35
Trim43bP86448 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim43bP86448 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim43bP86448 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Trim43bP86448 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim43bP86448 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43bP86448 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43bP86448 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Trim43bP86448 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Trim43bP86448 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43bP86448 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim43bP86448 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Trim43bP86448 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim43bP86448 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim43bP86448 Mir2861-201ENSMUST00000175539 82 ntBASIC17.2■□□□□ 0.34
Trim43bP86448 Mir7071-201ENSMUST00000184847 69 ntBASIC17.2■□□□□ 0.34
Trim43bP86448 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim43bP86448 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim43bP86448 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms