Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PrkcbP68404 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrkcbP68404 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PrkcbP68404 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PrkcbP68404 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PrkcbP68404 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.14■□□□□ 0.49
PrkcbP68404 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
PrkcbP68404 Gm27704-201ENSMUST00000185094 107 ntBASIC18.14■□□□□ 0.49
PrkcbP68404 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.14■□□□□ 0.49
PrkcbP68404 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PrkcbP68404 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PrkcbP68404 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PrkcbP68404 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PrkcbP68404 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
PrkcbP68404 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.13■□□□□ 0.49
PrkcbP68404 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.13■□□□□ 0.49
PrkcbP68404 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.13■□□□□ 0.49
PrkcbP68404 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.13■□□□□ 0.49
PrkcbP68404 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.13■□□□□ 0.49
PrkcbP68404 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PrkcbP68404 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PrkcbP68404 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PrkcbP68404 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.12■□□□□ 0.49
PrkcbP68404 Gm18421-201ENSMUST00000204122 625 ntBASIC18.12■□□□□ 0.49
PrkcbP68404 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PrkcbP68404 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PrkcbP68404 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.11■□□□□ 0.49
PrkcbP68404 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.11■□□□□ 0.49
PrkcbP68404 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.11■□□□□ 0.49
PrkcbP68404 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.11■□□□□ 0.49
PrkcbP68404 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PrkcbP68404 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PrkcbP68404 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.11■□□□□ 0.49
PrkcbP68404 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PrkcbP68404 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.1■□□□□ 0.49
PrkcbP68404 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.1■□□□□ 0.49
PrkcbP68404 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.1■□□□□ 0.49
PrkcbP68404 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.1■□□□□ 0.49
PrkcbP68404 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PrkcbP68404 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrkcbP68404 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PrkcbP68404 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms